The Shadow Temple can be confusing, since you'll need the Lens of Truth to navigate past hidden traps and secret pathways. We've got a full walkthrough of the Shadow Temple below, which will ensure you reach (and beat) the boss without getting lost, and provide you with all treasure chests and the 5 Gold Skulltulas within the dungeon itself.
The Bottom of the Well is a secret dungeon in Kakariko Village that requires you to learn the Song of Storms. Here's a full 100% walkthrough!
You won't be able to access the Spirit Temple until you've completed the Fire Temple and the Water Temple. You will then need to head to Kakariko Village to find Sheik. As adult Link, enter the windmill to learn the Song of Storms from the Music Man.
Return to Kakariko Village as child Link to play the Song of Storms and complete the Bottom of the Well dungeon to get the Lens of Truth. You can now go back to adult Link and play Nocturne of Shadow on the ocarina to find the Shadow Temple entrance in the Graveyard.
Before you begin, it's best if you go to the Death Mountain Crater Great Fairy so you can double your Magic, as the Lens of Truth consumes Magic.
When you enter the Shadow Temple, equip the Lens of Truth to reveal the unlit braziers in front of you. To light them, you can use Din's Fire, which will open the way forward.
In the next room, look east to find a Longshot target that will pull you to the other side.
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